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About NemaOmics

Why Study Nematodes?

Nematodes are among the most diverse organisms on Earth, playing crucial roles in agriculture, ecology, and plant disease. While some species are beneficial (such as entomopathogenic nematodes used in biocontrol), others, like root-knot and cyst nematodes, cause significant economic losses in crop production. Understanding their genetics and molecular mechanisms is key to developing sustainable management strategies.

Unlocking the Nematode Omics Landscape in India

NemaOmics is a pioneering bioinformatics resource dedicated to the comprehensive study of nematodes in India. This platform integrates multi-omics data, including genomics, transcriptomics, proteomics, and metabolomics, to enhance our understanding of nematode biology, diversity, and their impact on agriculture, human health, and the environment.

The Role of Omics in Nematode Research

Advancements in omics technologies have revolutionized nematode research by providing deeper insights into their genetic makeup, molecular interactions, and metabolic pathways.

  • Genomics: Reveals the complete genetic blueprint of nematodes, aiding in species identification and evolutionary studies.
  • Transcriptomics: Deciphers gene expression patterns under various conditions, helping to understand host-parasite interactions.
  • Proteomics: Identifies functional proteins involved in nematode physiology and pathogenicity.
  • Metabolomics: Explores biochemical pathways, shedding light on nematode adaptation and survival mechanisms.

Why NemaOmics?

NemaOmics is India’s first dedicated nematode omics database, providing:

  • A centralized repository for nematode genomic and molecular data.
  • Standardized datasets to facilitate comparative analysis.
  • Insights into nematode biodiversity across diverse Indian ecosystems.

Through NemaOmics, we aim to bridge the knowledge gap in nematode research, enhance collaborative studies, and contribute to sustainable nematode management in India.

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Vision of NemaOmics

To establish NemaOmics as a premier bioinformatics platform dedicated to the comprehensive molecular study of nematodes in India, enabling groundbreaking research in genomics, transcriptomics, proteomics, and metabolomics.

  • A centralized, open-access nematode omics database for researchers, policymakers, and agricultural practitioners.
  • Enhanced understanding of nematode biodiversity and interactions to support sustainable pest management and conservation strategies.
  • Empowering scientists with high-quality molecular data to drive innovations in nematode diagnostics, biocontrol, and resistance breeding.
  • Bridging traditional nematology with modern bioinformatics, fostering interdisciplinary collaborations at national and global levels.
  • Through NemaOmics, we aim to revolutionize nematode research, ensuring food security and ecological balance while advancing India's leadership in nematode omics studies.

Anguina tritici

A. tritici, commonly known as the seed gall nematode, is a plant parasitic nematode (PPN) that infects the seeds of wheat and barley, leading to the development of the earcockle disease. This nematode also acts as a vector for the bacteria Clavibacter tritici, causing tundu disease in their association. Anguina tritici is classified within the Anguinidae family, along with its closely related species Ditylenchus dipsaci and D. destructor. In the past decade, the genomes of several parasitic nematodes have been sequenced, enabling comparative genomic analyses that shed light on the gain or loss of novel genes among nematode species. As more genome sequences become available, researchers will be able to identify species-specific peculiarities in biological characteristics.

Genome Transcriptome Metabolome Proteome
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Development Team

  • Dr. Ashish Kumar Singh
    Scientist (Nematology), Division of Nematology, ICAR-IARI, New Delhi
    Email: sashish0825@gmail.com
  • Dr. Shbana Begam
    Scientist (Computer Applications & IT), ICAR-National Institute for Plant Biotechnology, New Delhi
  • Manish Kumar
    Ph.D. Scholar, Division of Nematology, ICAR-IARI, New Delhi
  • Dr. Vishal Singh Somvanshi
    Principal Scientist, Division of Nematology, ICAR-IARI, New Delhi
  • Prof. Anil Sirohi
    Professor, Division of Nematology, ICAR-IARI, New Delhi
  • Dr. Pankaj
    Head, Division of Nematology, ICAR-IARI, New Delhi

Contact Us

Main Contact:
Dr. Ashish Kumar Singh
Scientist (Nematology), Division of Nematology
ICAR-IARI, New Delhi
Email: sashish0825@gmail.com